Package: countprop 1.0.1

countprop: Calculate Model-Based Metrics of Proportionality on Count-Based Compositional Data

Calculates metrics of proportionality using the logit-normal multinomial model. It can also provide empirical and plugin estimates of these metrics.

Authors:Kevin McGregor [aut, cre, cph], Nneka Okaeme [aut]

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countprop.pdf |countprop.html
countprop/json (API)
NEWS

# Install 'countprop' in R:
install.packages('countprop', repos = c('https://kevinmcgregor.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kevinmcgregor/countprop/issues

Datasets:
  • singlecell - Single cell sequencing data from mouse embryonic stem cells in G1 phase

On CRAN:

Conda:

3.70 score 3 scripts 185 downloads 9 exports 15 dependencies

Last updated 2 years agofrom:cbee244490. Checks:1 OK, 8 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 11 2025
R-4.5-winNOTEMar 11 2025
R-4.5-macNOTEMar 11 2025
R-4.5-linuxNOTEMar 11 2025
R-4.4-winNOTEMar 11 2025
R-4.4-macNOTEMar 11 2025
R-4.4-linuxNOTEMar 11 2025
R-4.3-winNOTEMar 11 2025
R-4.3-macNOTEMar 11 2025

Exports:ebicebicPlotlogitNormalVariationlogLiklogVarTaylorFullmleLRmlePathnaiveVariationpluginVariation

Dependencies:bayesmcompositionsDEoptimRglassolatticeMASSMatrixNADARcppRcppArmadillorobustbasesurvivaltensorAtruncnormzCompositions

countprop

Rendered fromcountprop.Rmdusingknitr::rmarkdownon Mar 11 2025.

Last update: 2023-07-20
Started: 2023-07-19